Transcript Document

sea_bass
Fugu
Tilapia
Rainbow_tr
zebrafish
Alligator
Gallus
Rana
Human
Tilapia_DA
DBD
NR
*NR box 1 20
*
40
*
60
*
80 box 2
*
100
*
120
: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: ------------------------------------------------------------------------------------------------------------------------: MAGENHQWQGSILYNMLMSAKQTRAAPEAPETRLVDQCWGCSCGDEPGVGREGLLGGRNVALLYRCCFCGKDHPRQGSILYSMLTSAKQTYAAPKAPEATLGPCWGCSCGSDPGVGRAGLP
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sea_bass
Fugu
Tilapia
Rainbow_tr
zebrafish
Alligator
Gallus
Rana
Human
Tilapia_DA
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NR box 3
Poly Q stretch
*
140
*
160
*
180
*
200
*
220
*
240
----MATLEG-CRCRGASGRN-----NNSILYNILKSDS-LATAEEQQ---------------------------QQQQQQQQQQQHPQQQQTLQQLFHKT--SSTAAPASLQELR---QQ
----MATLEG-CRCRGSGGRNT----NNSILYSILKSDT-LATTEEQQPK-------------------------QQQQQQQQQQQQQQQQQSLQHLLFKSPPASTAAPASLQELR---QQ
----MATLEG-CRCRGASGRNNNSSSSSSILYSILKSDDRLVTAEEQQ-------------------------------------QHP-QQHTLQHLFQKP--PSSSASASLQEVR---QQ
----MATREG-CHCPGTGGQNN----NNSILYHILKNDR-LTTTEEQQ------------------------------------TITKPQQHQQHRWHRVSSCSSSSSSSSRLELRQ--QQ
----MAYFDSGCHCSSERRQN-------SILYSILKNDS--------------------------------------------------QSAQLG----------NQPRAPRLAVS---MR
------CVGRGRCCAGGR-RQG------SILYHILRS---------------------------------------------------EEQPR-----------GSGPGCSCG------AR
----MACLERCHCCADGR-RHG------SILYSILKS---------------------------------------------------HDQAAE----------GPGPRRGQA------GR
----MACLDKCHCAVDNR-RHG------SILYNILKN---------------------------------------------------EEHKDS----------HNSSKISKEDHSRLYGQ
GGRPVALLYRCCFCGEDHPRQG------SILYSLLTSSKQTHVAPAAPEARPGGAWWDRSYFAQRPGGKEALPGGRATALLYRCCFCGEDHPQQGSTLYCVPTSTNQAQAAPEERPRAPWW
--------MSCCECKVTQDTGQ-----GSILYSILNRG--------------------------------------------------ALCPQAR----------ADTTAAH--------R
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sea_bass
Fugu
Tilapia
Rainbow_tr
zebrafish
Alligator
Gallus
Rana
Human
Tilapia_DA
:
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LBD
*
260
*
280
*
300
*
320
*
340
*
360
TCSCGSTRRRGILRFPQVTCKAASAVLVKTLRFVKNVPCFRELPEDDQLMLIRSGWAPLLVLGLAQDRVDFETTETVEPSMLQRILTG---------------LPDRQSEVPAGQSRGAAG
ACSCGSTRRRGVLRSPQVTCKAASAVLVKTLRFVKNVPCFRELPEDDQLALIRSGWAPLLVLGLAQDRVDFETTETVEPSMLQRILTG---------------SPEGRNQALGCHSRTAAG
ACSCGSTRRRGVLRSPQVTCKAASAVLVKTLRFVKNVPCFRELPEDDQLVLIRSGWAPLLVLGLAQDRVDFETTETVEPSMLQRILTG---------------CPDRQSEAVGGQNRGAPG
ACSCGSSRRRGSLRSPQVTCKAASAVLVKTLRFVKNVPCFRELPEDDQLLLVRNCWAPLLVLGFAQDRVDFEITETAEPSMLQRILTGGSGSQS--------GLTDRQGEPLLEQSTETSG
ACASGS-KRKVSLRSPQTTCKAASAVLVKTLKFVKNVPCFRELPADDKHTLVRSGWAPLLVLGMAQDRIDFETSETQEPSMLQRILTS---------------QQDKQD-----NQSHNGG
GRGRGR-SRAAAGGER----AAAAAVLVKTLRFVKGVPCFQQLPLAEQLVLVRAAWAPLLVLGLAQDGVALPAHEAAQPSMLQRILTAR------------------------PPP----GCSCGS-QRRVALKSPQVVCKAASAVLVKTLRFVQNVPCFQELPLDEQLVLVRSCWAPLLVLGLAQERVHLETVESAEPSMLQRILTTRRLGE------------------HAPAPGRQHP
GCSCGS-QKKVTLKSPQVTCKAASAVLVKTLRFVKSVPCFQELPLEDQLLLVRSCWAPLLVLGLAQDKVNFETVETSEPSMLQRILTNSQGGENKLHHEHSEQDFLFGNSQHQQHNKLSQL
DTSSGA-LRPVALKSPQVVCEAASAGLLKTLRFVKYLPCFQVLPLDQQLVLVRNCWASLLMLELAQDRLQFETVEVSEPSMLQKILTTRRRETG----GNEPLPVPTLQHHLAPPAEARKV
CCSCASMRKLVAIRAPQSVIRAACEVLLKTFRFVKNVPCFRGLPADDQLRLVRNSWAPLLLLGLVQDSVDFDTVETQKPSLLHEILTH-----------------DANRRERTAGAAQHPG
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sea_bass
Fugu
Tilapia
Rainbow_tr
zebrafish
Alligator
Gallus
Rana
Human
Tilapia_DA
:
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*
380
*
400
*
420
*
440
*
460
* AF-2 480
VSVVDIEAIKAFLKKCWSVDISTKEYAYLKGAVLFNPDVEGLRCLHYIQSLRREAHQALNEHVRLIHREDTTRFAKLLIALSMLRAINPLVVAQLFFRPVIGAVNIEEVLMEMFYGKVSVLDIEAIKAFLKKCWSVDISTKEYAYLKGAVLFNPDVEGLRCLHYIQSLRREAHQALNEHVRLIHREDTTRFAKLLIALSMLRAIRPPVVAQLFLKPVIGTVNIEEVLMEMFYGKVSVVDIEAIKAFLKKCWSVDISTKEYAYLKGAVLFNPDLEGLRCLHYIQSLRREAHQALNEHVRLIHREDTTRFAKLLIALSMLRAISPPVVAQLFFRPVIGTVNIEEVLMEMFYGKVSLADIRASKRSLKKCWALDISTKEYAYIKGAVLFNSDLPGLRYLHYIQS-------------------------------------------------------------------VALTDVQGIKMFLRKCWGLDISTKEYAYLKGAILFNPDVAGLQCQHYIQALQSEANQALNEYVKMIHRGDSARFAKLFLALSMLRSINANVVAGLFFKPVIGAVNMEELLLEMFYGKPPAADLQALHGVLAKCWSLDIGPKEYAYLKGAVLFNPDLPGLQCTQYIQGLQREAQQALNEHVRLIHRGDQARFAKLNIALSLLRSINANVIAELFFRPIIGTVNMDDMLLEMLCAKL
PSAGEIQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLQCTQYIEGLQKEAQEALNEHVRLIHRGDQARFAKLNVVLSLLRSINANVIAELFFRPIIGSVNMDDMLLEMLCAKL
PSATEIRWIKEFLEKCWSLAISTKEYAYLKGIVLFNPGLPGLHCAQYIQGLQQEAHQALNEHVKMIQRWDNARFTKLIIVLSLLRSINANAISELFFRPIIGTVNMDDMLLEMLGAKI
PSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRPIIGTVSMDDMMLEMLCTKI
VPLCDVQSIQMFLVKCRGLTITVKEHAFLKGAILFTP-VPELECQEYIHALQREAERALYEHVGTVYRGNASRSGKLRVVLSTLRAVDTEAVAGLFLRPVTGTSSIDEHVLAMFCER-
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301
306
296
236
264
245
263
287
470
260
184
189
179
186
147
127
145
169
352
144