Open Science at Web-Scale: Breaking all Barriers? Dr Liz Lyon, Director, UKOLN, University of Bath, UK Associate Director, UK Digital Curation Centre eResearch Australasia, November.
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Transcript Open Science at Web-Scale: Breaking all Barriers? Dr Liz Lyon, Director, UKOLN, University of Bath, UK Associate Director, UK Digital Curation Centre eResearch Australasia, November.
Open Science at
Web-Scale: Breaking
all Barriers?
Dr Liz Lyon, Director, UKOLN, University of Bath, UK
Associate Director, UK Digital Curation Centre
eResearch Australasia, November 2009
UKOLN is supported by:.
This work is licensed under a Creative Commons Licence
Attribution-ShareAlike 2.0
www.ukoln.ac.uk
A centre of expertise in digital information management
UKOLN / DCC
Consultative Report
Six areas for
consultation
Published 10 Nov
http://www.jisc.ac.uk/publications/documents/opensciencerpt.aspx
Roadmap
• Research Data Signposts
: Directions of travel
• Barriers, Fuel or Freeway
: Scale, Openness,
Attribution
• Capacity and Capability
:Driving transformational
change
http://www.flickr.com/photos/lenakorsnes/3284269/
Research Data Signposts
: Directions of travel
http://www.flickr.com/photos/leongsoong/2429599748/
http://containerconversions.com/containergallery.php?cat=15
Your data in
their Cloud?
“all too many observations lie isolated
and forgotten on personal hard drives
and CDs trapped by technical, legal
and cultural barriers...”
Share
my
data?
November 2009
Why? Lack of awareness of potential?
Reluctance to collaborate and share?
The slow socialisation of science
• Science as a
social activity
• Inter-institutional collaboration –
better science (Brian Uzzi, 2008)
• Team science at Web-Scale?
Tweet
Blog
Comment
Rate
Vote
Recommend
Tag
Share
Mash
Barriers, Fuel or Freeway :
• Scale
• Openness
• Attribution
http://www.flickr.com/photos/natmeister/2153749348/
www.ukoln.ac.uk
A centre of expertise in digital information management
• Pacific Biosciences
California
• Next-next generation
sequencing
• Single molecule
sequencers
• Complete human
genome in 15 minutes
by 2013
www.ukoln.ac.uk
A centre of expertise in digital information management
www.ukoln.ac.uk
A centre of expertise in digital information management
• Infrastructure for Integration in the
Structural Sciences (I2S2)
• “Bridging the chasm” between large
scale facilities and the laboratory bench
• Integrated Information Model based on
the Core Scientific MetaData Schema
and the DCC Curation Lifecycle Model
• Use cases and Inter-disciplinary Pilots
• Cost-benefit analysis: before and after
Transcalar 4D
data modelling
of pancreatic
organogenesis
in mouse
Virtual
pancreas
computational
model
anticipates in
vivo biological
findings
• Citation of models?
• Curation & preservation
72 partners (Europe)
>40 models (coastal seas)
of models?
> 15 institute feeds
Validation & verification?
Societal implications?
“We can accurately
estimate the
current level of
weekly influenza
activity in the US
with a reporting lag
of about one day.”
Barriers, Fuel or Freeway :
• Scale
• Openness
• Attribution
http://www.flickr.com/photos/natmeister/2153749348/
Participation
Citizen
science
Continuum of
Openness
Volunteers
interested
amateurs
Professional,
experts
Lone
scholar
“dark
data”
Closed
Creative Commons Attribution-Non-Commercial-Share Alike 2.0
Open access
Access
Radical? Fringe?
Transferable to other disciplines?
Peer Production
Can this model be applied to other
disciplines?
Cost benefits?
An early citizen
scientist?
110 years later
Still engaging
the public in
science....
Working with professional scientists
How can
scientists
learn from
citizen
journalists?
Privacy issues?
“You have zero privacy anyway.
Get over it”
Scott McNealy, CEO Sun
Microsystems, 1999
Solve
puzzles
for
science
Crowdsourcing
science?
“Collaboration market”
New business model?
Costs?
Benefits?
Risks?
•
•
•
•
Attitudes to citizen science?
Strategy & policy implications for funders?
Impact on research quality?
Societal implications?
Barriers, Fuel or Freeway :
• Scale
• Openness
• Attribution
http://www.flickr.com/photos/natmeister/2153749348/
• H Factor – from Google Scholar
• Grant/Manuscript Review Factor – cumulated
authenticated reviews
• Annotations/Software/Datasets Factor – cumulated
entries to OA archive (data, sequences, software)
• Web Factor – authenticated blog / wiki posts
• Formal recognition?
• Incentive and reward structure?
• Research funder position?
• Publisher / learned society view?
Dec 16, Washington DC
Capacity and Capability:
Driving transformational change
http://www.flickr.com/photos/31601954@N07/2960517039/
Research
Infrastructure:
primary
components
People
Skills
Workflows
Research
Infrastructure
Data
Services
Process
Is your institution ready for
open science at Web-Scale?
New academic structures?
New
policies?
IPR
issues?
Library and
Information
Services roles? Open Science at Web-Scale Report 2009
New roles, new skills,
new curricula?
Advocacy & support?
Capacity
Community
curation
Data Informatics:
Logistics dilemma
Annotation
Audit
Data
cleansing
Data management
plans
Metadata schema
Observations
Ontologies
Preservation
Selection &
Appraisal
Training
Visualisation
Peer
production
Data
scientists ,
LIS
Professional
scientist
Capability
Citizens
Volunteers, interested amateurs
Creative Commons Attribution-Non-Commercial-Share Alike 2.0
Professional scientist
Take homes
1. Open Science =
accessible data +
wider participation
2. We need new metrics
3. Are our institutions
ready?
4. Capacity : Capability
5. Articulate range of
values and benefits
http://www.flickr.com/photos/dtmateojr/3835521363/
For Rosalind Franklin
http://www.britannica.com/EBchecked/topicart/217394/99712/Rosalind-Franklin
http://profiles.nlm.nih.gov/KR/B/B/H/K/
For whom,
open science
came too late...
Moving to
Multi-Scale
Science:
Managing
Complexity
& Diversity
Thank you
Slides will be available at :
http://www.ukoln.ac.uk/ukoln/staff/e.j.lyon/presentations.html
http://www.dcc.ac.uk/