Transcript PET Course Toxicogenomics

PET Course
Toxicogenomics
Practical Session 3
Wednesday 02 March 2011
ToxProfiler and PathVisio
Wednesday 02 March 2011: 13:30-1730
Program afternoon day3
“Identification of affected pathways and processes”
13:30-13:40 Introduction Practical Session Day3
13:40-15:10 ToxProfiler
- Geneset/pathway analysis of data
- Relates to talk by Andre Boorsma
15:10-15:20 Discuss ToxProfiler
15:20-15:40 Break (20 min)
15:40-17:10 PathVisio
- Visualize data in pathway
- Relates to talk by Susan Coort
17:10-17:20 Discuss PathVisio
17:20-17:30 Discuss ToxProfiler vs PathVisio
ToxProfiler
• http://ntc.voeding.tno.nl/tbase/toxprofiler_test/
• ToxProfiler is freely available
PathVisio
• http://www.pathvisio.org/
• PathVisio is freely available