Blood Culture Dilemmas - British Society for Microbial
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Transcript Blood Culture Dilemmas - British Society for Microbial
Dr Peter Cowling
Chair Bacteriology SMI Committee
UK Standards for Microbiological
Investigations (SMIs)
Steering Committee
Syndromic Algorithm Committee
Virology/ Serology SMI Committee
Bacteriology SMI Committee
Our responsibility
..does not start at the
laboratory door
Starts at the point the
clinician considers the
differential diagnosis
Our involvement in specimen pathway
From start
To finish
Partnership Working
Equal partners
Nominated representatives
Regular two way reporting
Optimal consultation processes
Increased joint ownership
Increased authority
NICE Accreditation
NHS Evidence accredited processes for SMIs
Follows AGREE protocol
Sets the UK standard for diagnostic microbiology
Covers whole specimen pathway
Also certified to ISO 9001:2008
SMI B 37
Investigation of Blood Cultures
Issued 27 March 2013
Issue number 7
Acknowledgements 1
Dr Shabnam Iyer
Dr Mike Weinbren
Mr Ian Sturgess
Consultation
Consultation through usual process
Additional parallel consultation through BIA
Total responses
Accepted
Partially accepted
Rejected
No action
59
23
6
7
23
B37 Amendments
Standards for TaTs
Inclusion of SIRS and neonatal sepsis
Removal of differential quantitative culture
Direct sensitivity testing
Inclusion of molecular methodologies
Contamination target <3%
Pre-incubation advice
Lab management of transportation
Dilemmas
TaTs and Transforming Pathology agenda
Meeting the needs and expectations of users (e.g
paediatricians)
Pre-loading handling of bottles (requesting/
transportation/ off site incubators/ off site culture)
Empirical blind antimicrobial treatment
Existing plate-based methodologies
Turnaround times (TaTs)
Proposals for improvement
Mike Weinbren, Shabnam Iyer, Ian Sturgess
Set standards for TaTs
Collection to loading
Initial positive reports and sens testing
Endorse rapid tests on positive bottles
Set standards for satellite/peripheral labs
Request CPA to formally include b.c audits
Request BSAC to recommend direct sens testing
Mike Weinbren’s audits
Load delay average 7h (max 20h)
Unload delay average 5h (max 14h)
On site laboratory
Worst out of hours and weekends
2nd audit of transport delays showed little delay on site
60% loaded within 2h of receipt but long tail on graph
(n=191). Bottles rec’d 24h but loaded only 08.00-19.00
Potential for saving up to 2 days of TaT if
loading/unloading delays are reduced + rapid testing
Kavi, Weinbren & Sturgess
survey
Telephone survey of blood culture methods in UK
43 respondents across UK
4/16 off site blood cultures stored in incubator
0/43 load during night
21/43 pre-incubate overnight, 22/43 at RT
31/43 have 24h on site shift systems (blood sciences)
1/43 rapid sens on GNBs, 41/43 do direct sens discs
Loading on
Blood Culture
Machine
Receipt in
Laboratory
Blood Culture
Collection
Transport Time
to Laboratory (TT)
Time from Receipt
to Loading
Time from Collection to Loading
Blood Culture
Flags Positive
Time to Detection
(TTD)
Time from
Placement to
Detection
Time from Flagging
Positive to Removal
Laboratory Turnaround
Time (LTAT)
Variable Time –
Opportunity to
Improve
Time Variable – NO
Opportunity to
Improve
Identification
and
Sensitivities
Time from Removal to
Results of Gram Stain,
Identification and
Sensitivities
Reporting of
Results
Time from Results
Availability to
Reporting Results
Time from Flagging Positive to Identification
Time to Reporting
and Susceptibility Results
Time to Positivity
(TTP)
KEY
Removal and
Initial Work
Turnaround Time (TAT)
Symptoms
Start
Patient seeks
medical
advice,
treatment
initiated
Patient dependent time
variable.
No opportunity to improve.
Treatment
ends
Appropriate Treatment
Therapeutic Window
Time
Patient
Survives
Symptoms
Start
Patient seeks
medical
advice,
treatment
initiated
Treatment
ends
Patient dependent time
variable.
No opportunity to improve.
Inappropriate Treatment
Therapeutic Window
Time
Patient
Dies
Symptoms
Start
Patient seeks
medical
advice,
treatment
initiated
Delayed Blood
Culture Result
Patient dependent time
variable.
No opportunity to improve.
Inappropriate Treatment
Therapeutic Window
Time
Treatment
ends
Appropriate
Treatment
Critical
Time
Patient
Dies
Symptoms
Start
Patient seeks
medical
advice,
treatment
initiated
Patient dependent time
variable.
No opportunity to improve.
Rapid Blood
Culture Result
Inappropriate Treatment
Therapeutic Window
Time
Treatment
ends
Appropriate Treatment
Critical
Time
Patient
Survives
Summary Table 1: Pre-Analytical Standards
Inoculated bottles should be incubated as soon as possible, and within a maximum of
four hours.
Investigative Stage:
Standard:
Pre-Analytical
Time Period
Collection to Incubation
≤4hr
The four hour turnaround time from collection to incubation for blood culture
samples reflects their clinical significance.
Summary Table 2: Analytical Standards
Results of the following identification and sensitivity tests (if performed) should be
completed within the following time frames from flagging positive:
Investigative Stage:
Analytical
Flagging Positive to Microscopy, Identification
and Sensitivities
Criteria:
Standard:
Test (if test performed)
Gram Stain
Rapid Antigen Testing
Molecular Assays
Isolate Identification (Direct/Automated)
Isolate Identification
(Conventional Methods)
Isolate Sensitivities (Direct/Automated)
Isolate Sensitivities
(Conventional Methods)
Time Period to Result
≤2hr
≤2hr
same day
≤24hr
24-48hr
≤24hr
24-48hr
Summary Table 3: Post-Analytical Standards
Standards have also been set for the laboratory turnaround time (the time between
receipt in the laboratory and reporting):
Investigative Stage:
Post-Analytical
Criteria:
Standard:
Report Type
Turnaround time
48hr *
Negative Report
Preliminary Negative Report
(dependant on local policy)
≤5 days
(from receipt in laboratory to negative reporting)
Final Negative Report
Preliminary Positive Report
(Telephone/Fax/Email)
Positive Report
(from receipt in laboratory to positive reporting)
Final Positive Report
(or greater if extended incubation
required)
Immediately, within 2hr of
identity/sensitivity availability.
(see Summary Table 2 above)
≤5 days
(or greater if extended incubation
required, or if isolates are sent to a
reference laboratory for confirmation)
*Refer to neonatal sepsis section of the introduction for further information
regarding negative reporting of neonatal blood culture.
User expectations
Neonatal blood cultures
NICE guideline CG 149 Aug 2012
Requirement for 36h reporting of a negative culture
Allows cessation of antimicrobials, 2nd gentamicin
dose
Allows timely discharge
Is cost effective
Duration of antibiotic treatment:
early-onset neonatal infection without meningitis
Positive blood culture or strong suspicion of infection
Usual antibiotic duration should be 7 days. Consider
longer if baby has not recovered or if advised.
Negative blood culture
Consider stopping antibiotics at 36 hours.
If continuing beyond 36 hours, review the baby at least
once every 24 hours to consider whether antibiotics
can be stopped.
NICE (CG 149) Aug 2012
Duration of antibiotics treatment:
decisions 36 hours after starting antibiotic treatment
To fully implement the guideline, hospital systems to
provide real time blood culture results at 36 hours are
needed.
Consider stopping antibiotics at 36 hours: if
•
•
•
•
blood culture is negative and
initial suspicion of infection was not strong and
baby’s clinical condition reassuring (no clinical
indicators) and
levels and trends of C-reactive protein are
reassuring.
NICE (CG 149) Aug 2012
Rationale for 36h decision
“Since the health economic analysis conducted for the
guideline showed that stopping antibiotic treatment at
36 hours in the babies listed above will be cost saving,
and one of the criteria for stopping treatment depends
on the result of blood culture, the cost savings can be
realised only if the blood culture results are available
within 36 hours.”
NICE (CG 149) Aug 2012
Antibiotics for suspected infection in the baby
Use intravenous benzylpenicillin with gentamicin as first-
choice.
Benzylpenicillin 25 mg/kg every 12 hours.
Gentamicin, starting dosage of 5 mg/kg.
If a second gentamicin dose is required, give 36 hours after
the first (interval may be shortened based on clinical
judgment).
(My emphasis)
NICE (CG 149) Aug 2012
Therapeutic monitoring for gentamicin
Trough concentrations
Measure trough immediately before second dose.
Concentrations should be available in time to inform the
next dose (If not, do not withhold dose unless renal
dysfunction is evident).
Consider repeating measurement of trough
concentrations at least before every third dose.
NICE (CG 149) Aug 2012
Neonatal blood cultures 36h rule:
UK experience
4/31 significant isolates >36h incl. 1 baby discharged
home
11/119 +ve cultures >36h post loading (9 contaminants,
2 CNS infections already on treatment). 23/119 >36h
post collection (4 significant but on antibiotics pre b.c.
and clinically septic)
92% 4410 cultures +ve <36h (100% of paediatric)
18/76 +ve cultures post collection (16 contaminants, 2
significant, 1 on treatment)
“nearly all signalled within 18h, never mind 36!”
Acknowledgments 2
Dr Tom Lewis
Dr Sarah Abu Hassan
Dr John Cheesbrough
Dr Alaric Colville
Dr J Kavi
Dr Martin Sheppard
Future dilemmas
Emergence of multi-resistance
Less effective & more toxic blind treatment
Need for replacement of 19th Century Microbiology
Rapid, molecular methodology for whole specimen
pathway (“Star Trek” vision)
Near patient testing
The Embarrassing Truth?
Blood Sciences
Microbiology
Laissez faire
Long TaTs generally accepted as the norm by
laboratories, users and patients
Technology available to revolutionise Microbiology
Insufficient challenge to status quo
Wrong focus
Laboratory accreditation-focussed
Not patient-focussed
ISO standards are an improvement
Purchaser Provider Model
Voice of the Customer
Purchaser - Provider
(adversarial)
Customer involvement
and joint ownership
(partnership)
Acknowledgements 3
The Standards Unit, PHE
Ruhi Siddiqui, Head of Unit
Clare Harris, Standards Microbiologist
Ayuen Lual, Standards Microbiologist
Ijeoma Ezeajughi, Research Scientist
Nicola Day, Technical Support Officer
Caroline Lawson, Information Office
Shirley Boland, Administrative Assistant
and……….Val Bevan and Brian Duerden
Thank you