Transcript Slide 1
The Battle of the Sexes:
A Study on Variations of HDL Levels in Female vs. Male Mice Presented by: Sean Roney Teresa Leslie Courtney Deshayes
What in the World is QTL-
• QTL- Quantitative Trait Locus • 2+ strains, phenotypic data vs. genotypic data • Summarizes action, interaction, number, and precise location of regions • Can compare with knockout and over expression
The Basic Background-
HDL- helps prevent cardiovascular disease
HDL vs. LDL Cardiovascular disease-
hardening of the arteries
Experimental Factors-
• Same environment, variation in plasma lipoprotein concentration – Genetic Background • Nutrition, “safe” high-fat diet – Similar to humans • Male vs. Female – Is sex a factor? – Compared two studies
Actual Experiment-
• Two Studies – 330 male R111x129 – 294 female B6x129 • Length – 12 weeks (male) and 14 weeks (female) • Plasma lipoprotein levels (HDL) in mice
Initial HDL Levels-
Sex:
Female Male
n
294 330
Plasma HDL mg/dl
81 +/- 1 143 +/- 2 • Males higher HDL levels, testosterone - Difference of about 62 mg/dl • Comparison- human females higher than males
QTL Analysis-
Male QTLs ↑ Female QTLs ↓
Table of Data-
• LOD scores range from 2.6-9.8
• Only HDL QTLs compared
Sex:
Male Female
# Sig QTLs
3 6
Hdlq5
X
Hdlq14 Hdlq15 Hdlq16 Hdlq17 Hdlq18 Hdlq19
X X X X X X X X
Results-
• Male- Hdlq5 candidate gene APOA2 • Female- Hdlq15 (interacts with Hdlq 14 and 19) APOA2 • Information relatable to humans • Confirmed with knockout and over expression methods
Other Findings-
• Female – Hdlq18 is novel – Hdlq16 leads to gene involved with lipoprotein metabolism • Both – Hdlq17 APOA1/APOC3/APOA4 – Male outside the 95% CI
Conclusion-
• Males and females have some comparable data • Females have several QTLs that males do not, investigate further • Information is relatable to humans
References-
• Malcolm A. Lyons, Ron Korstanje, Renhua Li, Kenneth A. Walsh, Gary A. Churchill, Martin C. Carey, and Beverly Paigen. “Genetic contributors to lipoprotein cholesterol levels in an intercross of 129S1/SvImJ and RIIIS/J inbred mice.” Physiol Genomics 17:114-121, 2004. First
published Feb 10, 2004.
• Ishimori, Naoki, Renhua Li, Peter M. Kelmenson, Ron Korstanje, Kenneth A. Walsh, Gary A. Churchill, Kristina Forsman-Semb, and Beverly Paigen. "Quantitative Trait Loci Analysis for Plasma HDL-Cholesterol Concentrations and Atherosclerosis Susceptibility Between Inbred Mouse Strains C57BL/6J and 129S1/SvImJ." Arteriosclerosis, Thrombosis, and Vascular Biology 24 (2003): 161-66.
• Miles, C. & Wayne, M. (2008) Quantitative trait locus (QTL) analysis. Nature Education 1(1) • Some homology data for this paper were retrieved from the Mouse Genome Database (MGD), Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, Maine. World Wide Web (URL: http://www.informatics.jax.org). (June 9, 2010)
A Monumental Thanks to-
• Randy Von Smith, PhD • Tobias Beckwith • Brook Milligan, PhD • Jackson Laboratories • NIH- RISE Program