Open Notebook Science: Public Scientific Data from the Laboratory Notebook North Carolina Science Blogging Conference Jean-Claude Bradley E-Learning Coordinator College of Arts and Sciences Associate Professor of Chemistry Drexel University Jan 19, 2008

Open and Closed Science Traditional Lab Notebook (unpublished) CLOSED Traditional Paper Textbook F2F lectures Traditional Journal Article Open Access Journal Article RESEARCH Open Notebook Science (full transparency) OPEN TEACHING Lectures Notes public Assigned problems public Archived Lectures Public and free online textbooks

What is the role of blogging in scientific research transparency?

UsefulChem

BLOG WIKI Mailing List GoogleDocs

Discussing Funding

Supporting Funding Initiatives

Highlight Popular Media Coverage

Highlight Peer-Reviewed Coverage

Announce Collaborator: Gus Rosania

Announce Collaborator: Matthias Zeller

Announce Collaborator: Phil Rosenthal

Discuss Presentations in Real Life

Discuss Presentations in Second Life

Showcase Science in New Media

Showcase Teaching in New Media

Alerts to Broader Impact Opportunities

Science Philosophy

Where’s the Beef?

Link to Lab Notebook Page in Wiki

Link to Molecules

Link to Experimental Plan

Link to Docking Procedure (Rajarshi Guha)

Link to Docking Results (Rajarshi Guha)

Procedure Section

Link to Raw Data with JSpecView

Conclusion is Fully Supported

Indexing the Experiments in Google

Comparing Experiments

The Most Important Section!

Results in Machine-Friendly Format

Comparing Results in a Table

Table of Contents

Recent Changes in Wiki

Tracking Versions of Wiki Pages

Comparing Versions of Wiki Pages

How are people finding our experiments?

Telling the story of the failures

Mailing List Facilitates inter-group collaboration

Open Primary Research in Drug Design using Web2.0 tools (blogs, wikis, Second Life, mailing lists) Rajarshi Guha Indiana U JC Bradley Drexel U Phil Rosenthal UCSF (malaria) Docking Synthesis Testing Tsu-Soo Tan Nanyang Inst.

Dan Zaharevitz NCI (tumors)

Where is Science headed?

WE ARE HERE

Cameron Neylon’s Notebook