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Imatinib Resistance Geoffrey L. Uy, M.D. Associate Professor of Medicine Division of Oncology Natural History of CML Time Chronic Phase Accelerated Phase Blast Phase Duration 3-5 yrs, untreated Varies Median of months Prognosis Responsive Less responsive Resistant Symptoms Asymptomatic Fatigue Weight loss Abdominal pain or discomfort Night sweats Progressive Splenomegaly Bleeding Infections Marrow fibrosis Disease Monitoring in CML • Hematologic response – Complete normalization of peripheral blood counts – No immature cells in peripheral blood (ie. Blasts) – No signs or symptoms of disease such as splenomegaly • Sufficient when therapy was relatively ineffective Disease monitoring in CML (Conventional Cytogenetics) Grow cells in culture and arrest in metaphase with colchicine Chromosomal banding • Giemsa-banding • G-banding regions AT-rich and gene poor. Analyze 20-30 cells (~5% sensitivity) Good for large gains, losses, & translocations Not sensitive for small lesions Disease monitoring in CML (Fluorescent in-situ Hybridization, FISH) Dual color, dual fusion probe BCR ABL-BCR •Sensitivity 1:200-1:500 •Can detect very small gains, losses and translocations •Need to know what you are looking for BCR-ABL Abl Disease monitoring in CML (qRT-PCR) • Make a cDNA library from the mRNA specimen • Design quantititive real time PCR to amplify across different fusion breakpoints • Detect specific transcript based on use of allele specific probe • Quantify relative expression to control gene, (B2-microglobulin or Abl) • Detect 1 in 106 Bcr-Abl transcripts Monitoring CML Sensitivity Hematologic Cytogenetic Molecular Karyotype (Ph chromosome) FISH PCR (BCR-ABL fusion) H&E stain Peripheral Blood Bone Marrow Chromosomal translocation Abnormal BCR-ABL (with myeloid cells) (myeloid hyperplasia) t(9;22)(q34;q11) Red= BCR Green= ABL Yellow=Fusion Abnormal BCR-ABL Lane 1= BCR-ABL+ sample Lane 2= BCR-ABL- sample Imatinib in CML Cumulative Best Response to Initial Imatinib Therapy. Druker et al., N Engl J Med. 2006 Dec 7;355(23):2408-17 Outcome of Imatinib by Response Druker et al., N Engl J Med. 2006 Dec 7;355(23):2408-17 Therapeutic Landmarks Months of treatment Treatment Failure Suboptimal response 3 No Hematologic Response Less than Complete Hematologic Response 6 Less than Complete Hematologic Response Ph+ cells >35 percent 12 Ph+ cells >35 percent Less than complete Cytogenetic Response 18 Less than complete Cytogenetic Response Less than major Molecular Response Clinical Observations with Imatinib • Virtually all patients with chronic phase disease respond to Imatinib (but to different degrees) • Patients with advanced disease / blast crisis have very transient responses • When imatinib is stopped, disease returns, ie. imatinib is NOT a cure Why doesn’t Imatinib work in everyone? • Drug Intolerance – Inability of a patient to continue therapy despite optimal management of side effects • Primary Resistance (Treatment-refractory Ph+) – Lack of efficacy after treatment initiation despite use of therapy at appropriate doses • Secondary Resistance (Acquired resistance) – Loss of efficacy despite use of therapy at optimal doses Is Imatinib Resistance BCR-ABL Dependent? • Expose bone marrow from patient with CML to increasing amounts of imatinib • Western blot for BCRABL, CRKL and P-CRKL Gorre et al. Science 2001 Aug 3;293(5531):876-80. BCR-ABL Activity in Relapsed Patients • Take samples from patients with relapsed disease and look for P-CRKL • Examine samples before, during treatment and at relapse Imatinib resistance associated with reappearance of functional BCR-ABL ie. BCR-ABL dependent Gorre et al. Science 2001 Aug 3;293(5531):876-80. How does this happen??? BCR-ABL FISH in Relapsed Patients (A) Patient with blast crisis during imatinib therapy (B) 2nd patient before, during and after therapy (C) FISH from patient showing duplicated inverted Phchromosome Gorre et al. Science 2001 Aug 3;293(5531):876-80. Sequencing of ABL Kinase Domain Gorre et al. Science 2001 Aug 3;293(5531):876-80. Model of Imatinib Binding of ABL Gorre et al. Science 2001 Aug 3;293(5531):876-80. BCR-ABL Kinase Domain Mutations Ba/F3 Model of CML growth + IL-3 Ba/F3 - IL-3 BCR-ABL CMV Ba/F3 - IL-3 + Imatinib Ba/F3 Model of CML growth CMV BCR-ABL(T315I) Ba/F3 - IL-3 + Imatinib Mechanisms of Imatinib Resistance • Gene amplification • ABL kinase domain mutations • Other mechanisms observed in vitro only – activation of BCR-ABL–independent pathways (Src family proteins) – increased drug efflux through the multidrug resistance gene Overcoming Imatinib resistance? Overcoming Imatinib Resistance • Novel BCR-ABL inhibitor, dasatinib (aka. BMS354825) in Ba/F3 Dasatinib against mutant BCR-ABL in Ba/F3 cell assays Most BCR-ABL mutations except T315I are sensitive to dasatinib Dasatinib in mouse model of CML • BCR-ABL luciferase transduced Ba/F3 cells • Injected into SCID mice • Treat with Dasatinib or vehicle Shah et al., Science 305, 399 (2004); Dasatinib in Imatinib-Resistant Philadelphia Chromosome-Positive Leukemias Talpaz et al., N Engl J Med. 2006 354(24):2531-41. Sensitivity of Bcr-Abl Mutations O'Hare T et al. Blood 2007;110:2242-2249 Clinical Responses to Dasatinib According to Mutation Type Targeting T315I - Ponatinib • Rationally designed inhibitor of BCR-ABL Ponatinib • Active against T315I mutant – Unique approach to accommodating gatekeeper residue – Binds inactive (closed) ABL conformation Ponatinib cocrystal structure with ABLT315I Ponatinib in Ba/F3 Assay A B * * * (*P < 0.01) (*P < 0.05) O’Hare T, et al. Cancer Cell. 2009;16:401-412. Conclusions • Both primary & secondary resistance is rare in chronic phase CML but extremely common in advanced stage, blast crisis CML • Mutations in Abl kinase domain are dominant mechanism for disease resistance • Understanding mechanisms of resistance can lead to rapid development of novel agents to overcome resistance Approach to Treatment of CML • Routine monitoring of patient cytogenetics, FISH and RT-PCR for BCR-ABL • If patients fail to meet therapeutic landmarks • Evaluate for kinase domain mutations – Increase dose of imatinib – Change to dasatinib or nilotinib – Clinical trial (3rd generation inhibitors) – Allogeneic stem cell transplant