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1 Investor Presentation March 2010 Forward-Looking Statements This presentation contains forward-looking statements made pursuant to the safe harbor provisions of the U.S. Securities Litigation Reform Act of 1995. Forward-looking statements involve known and unknown risks and uncertainties, which could cause the Æterna Zentaris’ actual results to differ materially from those in the forward-looking statements. Such risks and uncertainties include, among others, the availability of funds and resources to pursue R&D projects, the successful and timely completion of clinical studies, the ability of the Company to take advantage of business opportunities in the pharmaceutical industry, uncertainties related to the regulatory process and general changes in economic conditions. Investors should consult the Company’s quarterly and annual filings with the Canadian and U.S. securities commissions for additional information on risks and uncertainties relating to the forward-looking statements. Investors are cautioned not to rely on these forward-looking statements. The Company does not undertake to update these forward-looking statements and disclaims any obligation to update any such factors or to publicly announce the result of any revisions to any of the forward-looking statements contained herein to reflect future results, events or developments, except if we are required by a governmental authority or applicable law. 2 Æterna Zentaris Late-Stage Drug Development Company Specialized in Oncology and Endocrinology 3 Æterna Zentaris 4 Management team Juergen Ernst Executive Chairman 30+ years experience: Solvay Juergen Engel, Ph.D. President and CEO 30+ years experience: ASTA Medica Paul Blake, M.D. Senior VP and CMO 25+ years experience: Cephalon, SmithKline Beecham (now GSK), ICI Pharmaceuticals (now Astra Zeneca) Nicholas J. Pelliccione, Ph.D. Senior VP, Regulatory Affairs and QA 20+ years experience: Chugai Pharma USA , ScheringPlough Matthias Seeber, M.B.A. Senior VP, Administration and Legal Affairs 15+ years experience: Altana AG, Deka Investment Management, Dresdner Bank AG Dennis Turpin, CA Senior VP and CFO 20+ years experience: Coopers & Lybrand (now PWC) Late-Stage Oncology & Endocrinology Pipeline Compound Perifosine Indication Preclinical Phase 1 Phase 2 Multiple Myeloma Partners: Keryx (North America) & Handok (Korea) Metastatic Colon Cancer Partners: Keryx (North America) & Handok (Korea) Kidney Cancer and Others Partners: Keryx (N. America) & Handok (Korea) Phase 3 Endometrial Cancer AEZS-108 Ovarian Cancer Other Cancers AEZS-112 Solid Tumor AEZS-120 Tumor Vaccine Prostate Cancer AEZS-129/131 PI3K/Erk Inhibitor Oncology Cetrotide® In Vitro Fertilization AEZS-130 (SolorelTM) Diagnostic – Adult Growth Hormone Deficiency AEZS-130 (macimorelin) Therapeutic – Endocrinology AEZS-123 Ghrelin Antagonist Endocrinology Partners: Merck Serono, Nippon Kayaku / Shionogi (Japan) 5 Commercial Vision & Business Strategy of Æterna Zentaris Our vision: to become a fully-integrated specialty biopharmaceutical company Our Business Development Strategy − To retain co-marketing and/or co-promotion rights for our products − To retain rights for certain territories for our products − To have access to the development data of Licensee at no cost outside their territory • Example: Perifosine (Keryx for North America and Handok for Korea) 6 Perifosine: Abnormalities in the PI3K/Akt Signaling Pathway in Cancer Oral Akt inhibitor: Induction of apoptosis (cell death) & Inhibition of cellular proliferation and survival Brain Thyroid Breast Lung Blood (MM) Kidney Ovary Pancreas Liver Colon Prostate Skin Sarcoma 7 Perifosine in Multiple Myeloma (MM): Synergistic Effect to Velcade® 8 Velcade® (bortezomib) caspase ↑ apoptosis Perifosine blocks Velcade®-activated Akt Akt ↑ anti-apoptosis Perifosine (μM) 24h Perifosine (+) 5 μM Perifosine (-) Velcade® (bortezomib) 0 5 10 20 0 p-Akt 5 10 20 nM % control 120 100 80 60 40 Akt 20 p-ERK 0 ERK2 Reference: Hideshima et al. Blood 2006 0 2.5 5 0 5 7.5 Bortezomib (nM) Perifosine in MM: Phase 1 and 2 results 9 Perifosine + Velcade® +/- Dexamethasone in patients with relapsed / refractory MM Nb of patients ORR Median TTP Perifosine + Velcade® +/- Dex 73 41% 6.4 months Velcade® refractory 53 32% 5.7 months Velcade® relapsed 20 65% 8.8 months Perifosine + Velcade® + Dex well tolerated and active in heavily pretreated and relapsed/refractory MM including Velcade® resistant patients Durable responses with an extended PFS ASH 2009. Poster #1869 Perifosine in MM: Phase 3 Special Protocol Assessment (SPA) with FDA Phase 3 multi-center randomized registration trial comparing Perifosine + Velcade® + Dex vs. Velcade® + Dex in previously treated Velcade® patients, has been granted SPA and Fast-Track Review Patient enrollment initiated in December 2009 (n=400) Inclusion Criteria Prior Velcade®-based treatment (relapsed) Prior Revlimid® and/or thalidomide treatment (relapsed or refractory) 1 – 4 prior lines of treatment (i.e. Dex, stem cell transplant, and other approved/non-approved MM treatment) 10 Perifosine in MM: Phase 3 Special Protocol Assessment (SPA) with FDA Randomize Velcade® 1.3 mg/m2 x 4d Dex 20 mg x 8d Placebo 50 mg daily (n=200 patients) Evaluate after 6 wks If SD or > remain on tx Velcade® 1.3 mg/m2 x 4d Dex 20 mg x 8d Perifosine 50 mg daily (n=200 patients) Progression ~ 265 events (PD/death) Progression Off Study Off Study Primary Endpoint Progression Free Survival Each cycle = 21 days 11 Perifosine in MM: Large Market Opportunity 12 MM is the 2nd most prevalent blood cancer affecting 200,000 people worldwide and nearly 60,000 deaths/year Prevalence for − U.S.: 15,000 − EU – G5: 16,000 − Japan: 3,500 MM U.S. market: Over $3 billion in revenue in the coming years MM Current therapies − Velcade® (bortezomib – Millenium/Takeda): 2008 sales > $1 billion − Revlimid® (lenalidomide – Celgene): 2009 sales > $1.7 billion Source: Globocan 2002 & Frost and Sullivan Perifosine in Metastatic Colon Cancer (MCC): Synergistic Effect to Xeloda® 13 + Xeloda® (capecitabine) Apoptosis 5-FU sensitive Colon Cancer + Xeloda® (capecitabine) NF-kB↑ 5-FU resistant Colon Cancer Perifosine AKT NF-kB NF-kB↓ IKK Leleu et al., Blood, 2008. Synergy 5-FU treatment and Akt inhibition described in Kodach et al., Carcinogenesis, 2006 Perifosine in MCC: Phase 2 Results 14 38 patients were enrolled, of whom 35 were evaluable Average number of prior therapies: 2 Xeloda® 825mg/m2 BID d1-14 and perifosine 50 mg daily Group n CR n (%) PR n (%) SD > 12 wks n (%) CBR* PD < 12 wks n (%) Xeloda® + Perifosine 20 1 (5%) 3 (15%) 11 (55%) 15 (75%) 5 (25%) Xeloda® + Placebo 15 0 1 (7%) 5 (33%) 6 (40%) 9 (60%) * CBR: Clinical Benefit Rate defined as patients on treatment > 12 weeks achieving stable disease (SD) or better; p=0.036 Duration of response: Xeloda® + perifosine: CR – 34 months (ongoing); PR – 21, 19, 11 months Xeloda® + placebo: PR – 7 months Reference: ASCO-GI Symposium 2010 Perifosine in MCC: Phase 2 Results 15 Median Time to Progression (TTP) and Median Overall Survival (OS) for all patients Group n Xeloda® + Perifosine 20 Xeloda® + Placebo 15 Reference: ASCO-GI Symposium 2010 Median TTP OS 28 weeks 18 months [95% CI (12.0, 48.0)] [95% CI (10.8,25.7] 11 weeks 11 months [95% CI (9.0, 15.9)] [95% CI (5.3,16.9)] p = 0.0012 p = 0.0136 Perifosine in MCC: Phase 2 Results 16 Subgroup of 5-FU Refractory Patients A subgroup of 25 patients was evaluable for response n PR n (%) SD > 12 wks n (%) CBR* PD < 12 wks n (%) Xeloda® + Perifosine 14 1 (7%) 8 (57%) 9 (64%) 5 (36%) Xeloda® + Placebo 11 0 3 (27%) 3 (27%) 8 (73%) Group * CBR: Clinical Benefit Rate defined as patients on treatment > 12 weeks achieving stable disease (SD) or better; p=0.066 Duration of response for PR: 19 months Reference: ASCO-GI Symposium 2010 Perifosine in MCC: Phase 2 Results 17 Median TTP – 5-FU Refractory Patients p=0.0004 10 wks 18 wks A B A = 11 patients [95% CI (6.6, 11.0)] B = 14 patients [95% CI (12.0,36.0] Reference: Bendell J. ASCO-GI Symposium 2010 Perifosine in MCC: Phase 2 Results 18 Median OS – 5-FU Refractory Patients p=0.0088 6.8 months A 15.3 months B A = 11 patients [95% CI (4.8,11.7)] B = 14 patients [95% CI (8.4,26.0] Reference: Bendell J. ASCO-GI Symposium 2010 Perifosine in MCC: Phase 3 Special Protocol Assessment (SPA) with FDA SPA granted by FDA in February 2010 for Phase 3 X-PECT (Xeloda® + Perifosine Evaluation in Colorectal cancer Treament) trial Study will be a randomized (1:1), double-blind trial comparing the efficacy and safety of Xeloda® + perifosine vs. Xeloda® + placebo Approximately 40-50 U.S. sites will participate in the study Study is expect to begin in Q2-2010 and enrollment is expected to be completed in H2-2011 Primary endpoint is overall survival and secondary endpoints include ORR, PFS and safety 19 Perifosine in MCC: Market Opportunity The fourth most commonly diagnosed cancer and second leading cause of cancer-related deaths in the U.S. − Prevalence of colon cancer for: • • • U.S.: 146,000 EU – G5: 110,000 Japan: 85,000 About one third of patients already have metastatic disease at diagnosis No new FDA approved drugs since 2006 – need for new agents Current therapies for 1st and 2nd line of treatment [Xeloda®; Avastin® ; Erbitux®] have overall sales of 4 billion US$ Source: Globocan 2002 20 Perifosine in Advanced Metastatic Renal Cell Carcinoma (RCC): Rationale December 2009, The Journal of Urology, Camillo Porta and Robert A. Figlin: “Cumulative evidence links PI3K/Akt alterations with RCC and represents an ideal target for therapeutic intervention” “Only perifosine has already proven to be clinically active” Reference: J. Urol 2009;182:2569-2577 21 Perifosine in Advanced Metastatic RCC: Phase 2 Study Design Patients with advanced metastatic RCC Progressing after either one prior therapy with a VEGF receptor inhibitor - Sutent® or a VEGF receptor inhibitor and an mTOR inhibitor - Torisel® Single agent - Perifosine 100 mg daily Evaluate each 12 weeks CR, PR, Stable Disease Progression Continue On Study Off Study Primary Endpoint Each cycle = 21 days Progression Free Survival 22 Perifosine in Advanced Metastatic RCC: Phase 2 Results - Monotherapy 23 50 patients were enrolled of whom 46 were evaluable − 16 patients were refractory to both VEGF-R and mTOR inhibitors n PR n (%) SD > 12wks n (%) Median PFS (all patients) Median PFS (patients SD or >) 12.5 weeks [95% CI (11.9, 19)] 33 weeks [95% CI (24,60)] Overall survival All patients (VEGF-R inhibitor) 46 5 (11%) 16 (35%) Refractory patients (VEGF-R inhibitor + mTOR inhibitor) 16 1 (6%) 7 (44%) 16 weeks [95% CI (11.7, 33.6)] 33.6 weeks [95% CI (24, NR)] Reference: ASCO 2009 and 8th International Kidney Cancer Symposium, Sept 2009 Not reached (14/16 alive at 22+ months) Perifosine Summary > 1,800 patients studied in Phase 1 and 2 − Single agent and combination − No major haematological toxicity Phase 3 study in MM with SPA, Fast-Track review and Orphan Drug status granted by FDA and EMA – Patient enrollment initiated in Dec 2009 by our partner Keryx Phase 3 study in metastatic colon cancer with SPA granted by the FDA – Patient enrollment will be initiated in Q2-2010 by our partner Keryx Phase 2 studies ongoing in several other tumor types including renal cell cancer, glioma, Waldenstrom’s macroglobulinemia, and AML 24 AEZS-108: Magic Bullet Doxorubicin Targeted Conjugate AEZS-108 conjugate DOX payload Binding Internalization Nucleus Migration LHRH targeting agent 25 AEZS-108: Gynaecological Cancers Phase 1 Study 26 Dose Level 1 2 3 4 5 6 Dose [mg/m2] 10 20 40 80 160 (46*) 267 (76.8*) Patients treated 1 1 1 1 6 7 Duration (Tx cycles) 2 2 2 2 2, 3, 5 6, 6, 6 1, 3, 4, 5 6, 6, 6 1 CR (6)** 1 CR (6)** 1 PR (6)** 2 SD Response 2 SD Duration - Re-dosing at 3-week intervals (= 1 cycle) - * equivalent doxorubicin dose - ** treatment cycles (TX) completed Response - CR = complete response - PR = partial response - SD = stable disease AEZS-108: Phase 2 Study in Endometrial and Ovarian Cancer Design − Conventional “Simon Design” − Open-label study in patients with advanced or recurrent endometrial and platinum-resistant ovarian cancer − Two-stage design with up to 82 patients, 41 patients for each indication − Opening of stage 2 requires tumor remission in at least 2 of 21 evaluable patients in each indication Status − Response criteria for opening stage 2 were met for both indications − Enrollment for second stage completed for both indications − Preliminary evaluation revealed that primary endpoint of 5 or more responders was met for both indications − Study ongoing for PFS and OS 27 AEZS-112: Oral Tubulin and Topoisomerase II Inhibitor Novel small molecule with oral capsule formulation Multiple modes of action: − Inhibition of tubulin polymerization − Inhibition of topoisomerase II − Antiangiogenic properties − Cell cycle arrest Strong in vivo activity and efficacy in multi-drug resistant (mdr) tumor cell lines Phase 1 study (Dr Von Hoff, PI): 42 patients treated 12 patients with stable disease and time to failure of 5 – 14+ months Signs of activity in various indications including melanoma and cancers of colon/rectum, lung, pancreas, prostate. Safety profile makes AEZS-112 an excellent candidate for drug combinations 28 AEZS-120 (Prostate cancer vaccine) 29 Oral live prostate cancer vaccine Basic feature: recombinant Salmonella strain with proprietary secretion system of tumor antigen fused to immunostimulatory factor Bacterial carrier acts as “intrinsic adjuvant” and has the potential to activate components of the innate and adaptive immune system Based on approved oral typhoid live vaccine Salmonella typhi Ty21a, which has already been safely applied in > 250 Mio. doses Proof-of-Principle in animal model Off the shelf product, low cost of goods allows flexible pricing Platform technology AEZS-130 (SolorelTM; macimorelin (INN)) A Growth Hormone (GH) Secretagogue Oral Ghrelin Mimetic Oral administration Excellent binding to human ghrelin receptor (agonist mode) 5 Phase 1 clinical trials completed to date with a total of 100 subjects treated Status: Phase 3 diagnostic of adult GH deficiency Orphan drug status for use as diagnostic test granted by FDA Potential for Therapeutic indications given AEZS-130’s GHS Activity and Ghrelin mimetic activity 30 GH Concentration Following Oral Administration of AEZS-130 in Healthy Volunteers 0.005 mg/kg AEZS-130 0.05 mg/kg AEZS-130 0.125 mg/kg AEZS-130 0.25 mg/kgAEZS-130 0.5 mg/kg AEZS-130 Placebo GH concentration (ng/ml) 120 100 80 60 40 20 0 -20 0 60 120 time (min) 180 240 31 AEZS-130 (SolorelTM): Diagnostic Test for Adult GH Deficiency Preliminary Results 32 PEAK GH RESPONSES TO GHRH-ARGININE, SOLORELTM, AND ITT SolorelTM Better discrimination between adult GH deficiency patients and normal controls with SolorelTM, oral solution, compared to the currently used test with GHRH-Arginine, i.v. administration Reference: 2009 ENDO meeting. G. Merriam et al. Poster P2-749 Potential Therapeutic Indications for a GHS Ghrelin Mimetic Drug Ghrelin mimetic activity − Cachexia associated with cancer, COPD and AIDS • U.S. prevalence for cachexia: Cancer: 420 000 COPD: 3 200 000 AIDS: 315 000 − Post-operative ileus, diabetic gastroparesis Ref.: JE Morley et al. Am J clin Nutr 2006;83:735-743 33 GHS activity − Hypo-pituitary deficiency in adults − Idiopathic short stature, Turner’s syndrome, chronic renal failure in children − Lipodystrophy associated with HIV treatment 34 Financials Selected Annual Financial Results (in millions of US dollars) Revenues License fees Sales and royalties Other Operating Expenses Cost of sales, excluding D&A R&D costs, net SG&A expenses D&A Loss from operations Other income (expenses) Loss before income taxes Income tax expense Net loss 35 For the years ended December 31, 2009 December 31, 2008 42.2 21.0 63.2 8.5 29.5 0.5 38.5 16.5 43.8 16.0 10.8 87.1 (23.9) (0.8) (24.7) (24.7) 19.3 57.1 17.3 7.1 100.8 (62.3) 3.7 (58.6) (1.2) (59.8) Cash Flows (Non-GAAP) (in millions of US dollars) (unaudited) Cash, cash equivalents & s.-t. investments* – beginning of the period 36 For the year ended December 31, For the year ended December 31, 2009 2008 49.7 41.4 (24.1) (1.3) Net cash provided by (used in) financing activities 14.2 (1.2) Net cash provided by (used in) investing activities (0.2) 13.6 Exchange rate fluctuation impact and other (1.5) (2.8) (11.6) (8.3) 38.1 49.7 Net cash used in operating activities Cash, cash equivalents & s.-t. investments – end of the period * Excluding restricted cash (2009 only); no short-term investments as at December 31, 2009. 37 Goals for 2010 2010 Goals Perifosine: Oral Akt inhibitor Our partner, Keryx, to progress patient enrollment for the randomized Phase 3 placebo-controlled registration study in multiple myeloma (MM) according to the SPA agreed protocol with FDA Keryx to initiate a Phase 3 trial in Metastatic Colon Cancer in Q2-2010 according to the SPA protocol with the FDA Report results for ongoing Phase 2 studies in MM, Metastatic Colon Cancer, Pediatric Solid Tumors and other cancers AEZS to update development and registration strategy for ex-North American territories, including Europe and Asia 38 2010 Goals AEZS-108: Doxorubicin-targeted conjugate Report final results from Phase 2 study in advanced ovarian and advanced endometrial cancer Initiation of additional clinical studies in advanced ovarian or advanced endometrial cancer Initiation of one or more Phase 1/2 trials in other LHRH expressing cancer types 39 2010 Goals AEZS-130 (SolorelTM): Oral ghrelin agonist Completion of Phase 3 study for diagnostic test for adult growth hormone deficiency (GHD) Filing of an NDA in U.S. as diagnostic test for adult GHD pending successful completion of Phase 3 study Initiation of clinical program in pediatric GHD Update development and registration strategy − “Rest of world” as diagnostic test in adult and pediatric GHD Explore potential for therapeutic use 40