Transcript Quantifying Pattern 1
Why Quantify Landscape Pattern?
• Comparison (space & time) – Study areas – Landscapes • Inference – Agents of pattern formation – Link to ecological processes
Programs for Quantifying Landscape Pattern
• FRAGSTATS – http://www.umass.edu/lan deco/research/fragstats/do cuments/Metrics/Metrics %20TOC.htm
• Patch Analyst – http://flash.lakeheadu.ca/~ rrempel/patch/
Quantifying Landscape Pattern
•
Just because one can measure it, doesn’t mean one should
– Does the metric make sense?...biologically relevant?
– Avoid correlated metrics – Cover the bases (comp., config., conn.)
Landscape Metrics - Considerations
• Selecting Metrics…… – Subset of metrics needed that: • i) explain (capture) variability in pattern • ii) minimize redundancy (i.e., correlation among metrics = multicollinearity) – O’Neill et al. (1988) Indices of landscape pattern. Landscape Ecology 1:153-162 • i) eastern U.S. landscapes differentiated using – dominance – contagion – fractal dimension
Landscape Metrics - Considerations
• Selecting Metrics…… – Use species-based metrics – Use Principal Components Analysis (PCA)?
– Use Ecologically Scaled Landscape Indices (ESLI; landscape indices, scale of species, and relationship to process)
Quantifying Pattern: Corridors
• Internal: – Width – Contrast – Env. Gradient • External: – Length – Curvilinearity – Alignment – Env. Gradient – Connectivity (gaps)
Quantifying Pattern: Patches
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Levels
: – Patch-level • Metrics for indiv. patches – Class-level • Metrics for all patches of given type or class – Zonal or Regional • Metrics pooled over 1 or more classes within subregion of landscape – Landscape-level • Metrics pooled over all patch classes over entire extent
Quantifying Pattern: Patches
• •
Composition
: – Variety & abundance of elements
Configuration
: – Spatial characteristics & dist’n of elements
Quantifying Pattern: Patches
• •
Composition
: – Mean (or mode, median, min, max) – Internal heterogeneity (var, range)
Spatial Characters
: – Area (incl. core areas) – Perimeter – Shape
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Quantifying Pattern: Landscapes (patch based)
Composition
: – Number of patch type • Patch richness – Proportion of each type • Proportion of landscape – Diversity • Shannon’s Diversity Index • Simpson’s Divesity Index – Evenness • Shannon’s Evenness Index • Simpson’s Index
Quantifying Pattern: Patches
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Configuration
: – Patch Size & Density • Mean patch size • Patch density • Patch size variation • Largest patch index
Patch-Centric vs. Landscape-Centric • •
Mean
– avg patch attribute; for randomly selected patch
Area-weighted mean
- avg patch attribute; for a cell selected at random
Patch-Centric vs. Landscape-Centric • Consider relevant perspective…landscape more relevant?...use area weighted • Look at patch dist’ns…right skewed = large differences
Quantifying Pattern: Patches
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Configuration
: – Shape Complexity • Shape Index • Fractal Dimension • Fractals = measure of shape complexity (also amount of edge) • Fractal dimension (d) ranges from 1.0 (simple shapes) to 2.0 (more complex shapes) • ln(A)/ln(P), where A = area, P = perimeter
Quantifying Pattern: Patches
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Configuration
: – Core Area (interior habitat) • # core areas • Core area density • Core area variation • Mean core area • Core area index
Quantifying Pattern: Patches, Zonal
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Configuration
: – Isolation / Proximity • Proximity index • Mean nearest neighbor distance
Proximity
PX i
s k n k
where, within a user-specified search distance:
s k
= area of patch
k
within the search buffer
n k
= nearest-neighbor distance between the focal patch cell and the nearest cell of patch
k
• Proximity Index (PXi) = measure of relative isolation of patches; high (absolute) values indicate relative connectedness of patches
Quantifying Pattern • Overlay hexagon grid onto landcover map • Compare bobcat habitat attributes to population of hexagon core areas
Quantifying Pattern • Landscape metrics include: • Composition (e.g., proportion cover type) • Configuration (e.g., patch isolation, shape, adjacency) • Connectivity (e.g., landscape permeability)
Quantifying Pattern & Modeling
P ij
k p
1
ki
kj
2 /
pV k
• Calculate and use Penrose distance to measure similarity between more bobcat & non-bobcat hexagons • Where: • population
i
represent core areas of radio-collared bobcats • population
j
represents NLP hexagons • • • •
p μ k V
is the number of landscape variables evaluated is the landscape variable value is each observation is variance for each landscape variable after Manly (2005)
Variable Penrose Model for Michigan Bobcats % ag-openland Mean Vector bobcat hexagons 15.8
NLP hexagons 32.4
% low forest % up forest 51.4
17.6
10.4
43.7
% non-for wetland % stream % transportation Low for core Mean A per disjunct core Dist ag Dist up for CV nonfor wet A 8.6
3.4
3.0
27.6
0.7
50.0
55.0
208.3
2.3
0.9
5.2
3.6
2.6
44.9
43.6
120.1
Quantifying Pattern & Modeling • Each hexagon in NLP then receives a Penrose Distance (PD) value • Remap NLP using these hexagons • Determine mean PD for bobcat-occupied hexagons Preuss 2005